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Efficient algorithms for rigid body integration using optimized splitting methods and exact free rotational motion

机译:使用优化的高效刚体集成算法   分裂方法和精确的自由旋转运动

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摘要

Hamiltonian splitting methods are an established technique to derive stableand accurate integration schemes in molecular dynamics, in which additionalaccuracy can be gained using force gradients. For rigid bodies, a traditionexists in the literature to further split up the kinetic part of theHamiltonian, which lowers the accuracy. The goal of this note is to comment onthe best combination of optimized splitting and gradient methods that avoidssplitting the kinetic energy. These schemes are generally applicable, but theoptimal scheme depends on the desired level of accuracy. For simulations ofliquid water it is found that the velocity Verlet scheme is only optimal forcrude simulations with accuracies larger than 1.5%, while surprisingly amodified Verlet scheme (HOA) is optimal up to accuracies of 0.4% and a fourthorder gradient scheme (GIER4) is optimal for even higher accuracies.
机译:哈密​​顿分裂法是一种建立稳定且精确的分子动力学积分方案的成熟技术,其中可以使用力梯度获得额外的精度。对于刚体,文献中存在一种传统,以进一步拆分汉密尔顿方程的动力学部分,这会降低精度。本注释的目的是评论避免分裂动能的最佳拆分和梯度方法的最佳组合。这些方案通常是适用的,但是最佳方案取决于所需的精度水平。对于液态水的模拟,发现速度Verlet方案仅是对精度大于1.5%的粗略模拟的最佳选择,而令人惊讶的是,修改后的Verlet方案(HOA)最高达0.4%的精度是最优的,而四阶梯度方案(GIER4)则是最优的以获得更高的精度。

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